Table 1 Virus peptides identified from plants by tandem mass spectrometry
Inoculum | Sample | Peptide | Spectra | Missed cleavages | Ions score* | P-value | Observed peptide mass | Hypothetical peptide mass | Charge state | Record annotation |
|---|---|---|---|---|---|---|---|---|---|---|
1-34CE-ToMV CP-30 | NN local lesion 1 | RVDDATVAIR | 2 | 1 | 50 | 3.20E-03 | 558.3115 | 1114.6095 | 2+ | ToMV CP |
| Â | Â | IIEVENQQSPTTAETLDATR | 2 | 0 | 122 | 3.50E-11 | 1108.5559 | 2215.0968 | 2+ | ToMV CP |
1-34CE-ToMV CP-30 | NN local lesion 2 | RVDDATVAIR | 2 | 1 | 50 | 2.40E-03 | 558.3115 | 1114.6095 | 2+ | ToMV CP |
| Â | Â | IIEVENQQSPTTAETLDATR | 2 | 0 | 128 | 2.10E-11 | 1108.5561 | 2215.0968 | 2+ | ToMV CP |
1-34CE-ToMVnoorf6-30 | Nicotiana benthamiana | RVDDATVAIR | 3 | 1 | 58 | 1.20E-03 | 558.3113 | 1114.6095 | 2+ | ToMV CP |
| Â | Â | SAINNLVNELVR | 6 | 0 | 81 | 4.30E-06 | 671.3783 | 1340.7412 | 2+ | ToMV CP |
| Â | Â | IIEVENQQSPTTAETLDATR | 1 | 0 | 105 | 2.20E-09 | 1108.5542 | 2215.0968 | 2+ | ToMV CP |
| Â | Â | TTVQQQFSEVWKPFPQSTVR | 1 | 0 | 89 | 1.70E-08 | 1197.1170 | 2392.2176 | 2+ | ToMV CP |
1-34CE-BSMV CP-30 | N. benthamiana | SQVAEYLAALDR | 3 | 0 | 104 | 4.90E-08 | 668.3484 | 1334.6830 | 2+ | BSMV CP |
| Â | Â | GQIGLPNYLPAPK | 1 | 0 | 49 | 4.50E-04 | 684.3877 | 1366.7609 | 2+ | BSMV CP |
| Â | Â | ATTNPSPPAQAPSENLTLR | 1 | 0 | 109 | 2.00E-09 | 983.0071 | 1963.9963 | 2+ | BSMV CP |