Table 3 Gene expression and methylation correlation
From: DNA methylome profiling of human tissues identifies global and tissue-specific methylation patterns
Gene region | Neg PCCsa | Pos PCCsb | PCCs < -0.5c | PCCs >0.5d | Totale |
|---|---|---|---|---|---|
Global | 5,710 | 4,410 | 1,713 | 1,090 | 10,120 |
56.42% | 43.58% | 16.93% | 10.77% | ||
Promoter + CGI | 3,048 | 2,325 | 618 | 567 | 5,373 |
56.73% | 43.27% | 11.50% | 10.55% | ||
TSS1500 | 4,175 | 4,581 | 958 | 1,064 | 8,756 |
47.68% | 52.32% | 10.94% | 12.15% | ||
TSS200 | 4,157 | 3,199 | 979 | 747 | 7,356 |
56.51% | 43.49% | 13.31% | 10.15% | ||
5’UTR | 1,500 | 1,604 | 382 | 442 | 3,104 |
48.32% | 51.68% | 12.31% | 14.24% | ||
1st exon | 1,330 | 1,409 | 272 | 357 | 2,739 |
48.56% | 51.44% | 9.93% | 13.03% | ||
Body | 5,156 | 4,620 | 1,573 | 1,185 | 9,776 |
52.74% | 47.26% | 16.09% | 12.12% | ||
3’UTR | 3,302 | 3,494 | 903 | 854 | 6,796 |
48.59% | 51.41% | 13.29% | 12.57% | ||
Shores | 4,534 | 3,365 | 1,362 | 792 | 7,899 |
57.40% | 42.60% | 17.24% | 10.03% | ||
Shelves | 2,342 | 2,201 | 718 | 576 | 4,543 |
51.55% | 48.45% | 15.80% | 12.68% |