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Table 3 Challenge participants

From: An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge

Contest result

Contestant

Winner

The Brigham and Women's Hospital, Multi-Institutional Consortium (Boston, MA, USA)

Runners-up

Genomatix (Munich, Germany), CeGaT (Tübingen, Germany), Institute of Pathology, University Hospital of Bonn (Bonn, Germany)

Iowa Institute of Human Genetics, University of Iowa (Iowa City, IA, USA)

Finalists

Clinical institute of Medical Genetics, University Medical Centre Ljubljana (Ljubljana, Slovenia)

Scripps Translational Science Institute (San Diego, CA, USA)

Science For Life Laboratory (SciLifeLab), Karolinska Institute (Stockholm, Sweden)

SimulConsult/Geisinger (Chestnut Hill, MA, USA and Danville, PA, USA)

The Research Institute at Nationwide Children's Hospital (Columbus, OH, USA)

Completed the contest

Tel Aviv University (Tel Aviv, Israel)

Genome Institute of Singapore, A*STAR (Singapore)

National Institutes of Health, Regeneron Pharmaceuticals and Stanford University (Bethesda, MD, USA; Tarrytown, NY, USA; Palo Alto, CA, USA)

Yale School of Public Health, Division of Biostatistics (New Haven, CT, USA)

River Road Bio/SNPedia (Potomac, MD, USA)

Pearlgen (Durham, NC, USA)

Institute for Systems Biology (Seattle, WA, USA)

Strand Life Sciences (Bangalore, India)

Sanofi (Cambridge, MA, USA)

Universidad de Cantabria (Santander, Spain)

Radboud University Nijmegen Medical Center (Nijmegen, Netherlands)

Seven Bridges Genomics (Cambridge, MA, USA)

Omicia Inc/University of Utah (supported by LocusDev Inc (now InVitae)) (Emeryville, CA, USA)

The University of Texas Health Science Center at Houston, The Brown Foundation Institute of Molecular Medicine (Houston, TX, USA)

FORGE Canada Consortium (Ottawa, ON, Canada)

Did not complete the contest

BGI (Shenzhen, China)

British Columbia Cancer Agency (Vancouver, BC, Canada)

Genedata AG (Basel, Switzerland)

HudsonAlpha Institute for Biotechnology (Huntsville, AL, USA)

IRCCS Casa Sollievo della Sofferenza (San Giovanni Rotondo, Foggia, Italy)

NextBio (Santa Clara, CA, USA)

 

The Medical College of Wisconsin (Milwaukee, WI, USA)