From: Kraken: ultrafast metagenomic sequence classification using exact alignments
 | HiSeq | MiSeq | simBA-5 | |||
---|---|---|---|---|---|---|
Classifier | Precision | Sensitivity | Precision | Sensitivity | Precision | Sensitivity |
Megablast | 99.03 | 79.00 | 92.44 | 75.76 | 96.93 | 93.67 |
NBC | 82.33 | 82.33 | 77.78 | 77.78 | 97.64 | 97.64 |
PhymmBL | 79.14 | 79.14 | 76.21 | 76.21 | 96.11 | 96.11 |
PhymmBL65 | 99.13 | 73.95 | 92.47 | 73.03 | 99.08 | 95.45 |
Kraken | 99.20 | 77.15 | 94.71 | 73.46 | 99.90 | 91.25 |
Kraken-Q | 99.12 | 76.31 | 94.69 | 70.41 | 99.92 | 89.54 |
MiniKraken | 99.44 | 66.12 | 97.41 | 67.95 | 99.95 | 65.87 |
MiniKraken-Q | 99.36 | 65.67 | 97.32 | 65.84 | 99.98 | 65.31 |
Kraken-GB | 99.51 | 93.75 | 98.48 | 86.23 | 99.48 | 91.13 |