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Figure 3 | Genome Biology

Figure 3

From: A comprehensive evaluation of assembly scaffolding tools

Figure 3

Genome-scale data results. (a) S. aureus GAGE data, (b) P. falciparum combined short and long data and (c) human chromosome 14 combined short and long insert data. Scatterplots show the relationship between correct and incorrect joins made by each scaffolder. Boxplots show the distribution of summary scores when iterating over different score combinations. The white circles in the boxplots denote the score from our chosen weighting system that focuses on penalising errors (with weights: correct join = 80, incorrect join = 160, lost tag = 160, skipped tag = 40, running time = 1).

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