Table 2 Comparison of PROmiRNA with other methods
From: PROmiRNA: a new miRNA promoter recognition method uncovers the complex regulation of intronic miRNAs
Percentage of miRNAs with a promoter | PROmiRNA | Barski et al. | Ozsolak et al. |
|---|---|---|---|
All | 82.6% (1,228/1,506) | 43% (233/541) | 48% (177/370) |
Intergenic | 83.7% (389/465) | 28% (50/182) | 38.4% (40/104) |
Intragenic | 80% (831/1,041) | 50% (172/343) | 65.2% (137/210) |
Intronic | 60.5% (630/1,041) | 14% (47/343) | 31% (43/210) |