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Table 2 Comparison of PROmiRNA with other methods

From: PROmiRNA: a new miRNA promoter recognition method uncovers the complex regulation of intronic miRNAs

Percentage of miRNAs with a promoter PROmiRNA Barski et al. Ozsolak et al.
All 82.6% (1,228/1,506) 43% (233/541) 48% (177/370)
Intergenic 83.7% (389/465) 28% (50/182) 38.4% (40/104)
Intragenic 80% (831/1,041) 50% (172/343) 65.2% (137/210)
Intronic 60.5% (630/1,041) 14% (47/343) 31% (43/210)