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Table 2 Average haplotype length for different groups of germplasm.a

From: Comprehensive genotyping of the USA national maize inbred seed bank

Type Chromosome number Mean
  1   3 4 5 6 7 8 9 10  
All maize 49.8 49.7 53.0 58.9 49.8 51.0 52.3 51.6 48.7 57.8 52.3
Tropical 51.9 43.0 43.9 46.5 43.5 38.1 43.0 43.5 42.6 43.3 43.9
Stiff stalk 494.4 493.3 546.6 523.5 432.9 527.8 410.5 488.9 388.4 647.0 495.3
Non-stiff stalk 170.5 135.7 149.0 154.1 164.2 123.6 156.5 132.6 144.9 190.7 152.2
ExPVPb 200.8 203.0 170.8 216.1 192.5 186.0 179.4 209.3 168.8 277.4 200.4
Monsanto 268.4 384.9 246.0 327.4 318.0 253.6 221.7 277.1 232.2 333.8 286.3
Pioneer 223.6 139.6 167.8 226.5 170.5 198.9 206.7 175.6 188.3 267.2 196.5
Association panel 79.6 79.8 90.1 87.4 76.3 81.7 75.3 81.9 76.2 86.4 81.5
NAMc 45.0 45.4 53.6 57.0 47.9 43.3 43.3 52.3 43.4 52.1 48.3
  1. aNumber of sites defining a haplotype by chromosome calculated using genotyping by sequencing; markers for different groups of germplasm.
  2. b Expired Plant Variety Protection
  3. c Nested association mapping