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Table 1 Data used in assemblies and scaffolding

From: Draft genome of the mountain pine beetle, Dendroctonus ponderosae Hopkins, a major forest pest

Sequence type Number of reads, millions read length, bp Total coverage, Gbp Fragment length, bp Sequence coverage
Male PET 387 76-114 41 630 200×
Male PET 480 100-114 50 590 243×
Female PET 328 150 49 425 227×
MPET 610 76-101 59 6600 290×
MPET 72 51 3.7 10000 18×
MPET 90 51 4.6 12000 22×
RNA-seq 257 51-76 13 170 NA
Paired end Sanger ESTs 0.18 750 0.135 1100 NA
  1. EST, Expressed sequence tag, MPET, mate-paired end tag; NA, not applicable; seq, sequencing..