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Table 1 Comparison of FPC with LTC assemblies of 1BS BAC contigs and scaffolds

From: The physical map of wheat chromosome 1BS provides insights into its gene space organization and evolution

Contigs with ≥6 clones

FPC contigs

LTC contigs

LTC scaffolds

Average clone number in contigs

65.8

133.3

565.5

Maximal clone number

580

868

2,587

Average contig size (kb)a

531

1,076

4,564

Maximal contig size (kb)a

4,681

7,006

20,881

N50 (kb)a

1,033

2,430

8,515

L50

81

35

11

N90 (kb)a

250

670

2,260

L90

292

115

34

Coverage in length (Mb, % of 1BS)a

275 (88%)

273 (87%)

260 (83%)

  1. aCalculated based on the number of clones, mean clone length and coverage.
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Genome Biology

ISSN: 1474-760X

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