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Figure 2 | Genome Biology

Figure 2

From: TRAPID: an efficient online tool for the functional and comparative analysis of de novoRNA-Seq transcriptomes

Figure 2

Visualization of a phylogenetic tree with associated meta-annotation labels per transcript. Cladogram based on a FastTree2 phylogenetic tree for the alpha/beta-Hydrolases superfamily (based on PLAZA 2.5 gene family HOM002165). Transcripts are marked in black, while colored gene identifiers refer to homologs from reference species: Ostreococcus tauri (ota), Physcomitrella patens (ppa), Populus trichocarpa (ptr), Arabidopsis thaliana (ath), Oryza sativa ssp. Japonica (osa), Sorghum bicolor (sbo), and Zea mays (zma). Meta-annotation for the different transcripts is visualized using the colored boxes on the right.

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Genome Biology

ISSN: 1474-760X

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