Table 2 In- cis miRNAs confirmed in the replication cohort
miRNA | MIMAT id | Chromosomal location (hg19) | Replicated aberration type |
|---|---|---|---|
let-7e-3p | MIMAT0004485 | 19q13.41 | Hypermethylation |
miR-125a-5p | MIMAT0000443 | 19q13.41 | Hypermethylation |
miR-130b-3p | MIMAT0000691 | 22q11.21 | Gain |
miR-135b-5p | MIMAT0000758 | 1q32.1 | Hypomethylation |
miR-141-3p | MIMAT0000432 | 12p13.31 | Gain |
miR-142-3p | MIMAT0000434 | 17q22 | Hypomethylation |
miR-142-5p | MIMAT0000433 | 17q22 | Hypomethylation |
miR-148a-3p | MIMAT0000243 | 7p15.2 | Hypermethylation |
miR-148a-5p | MIMAT0004549 | 7p15.2 | Hypermethylation |
miR-148b-3p | MIMAT0000759 | 12q13.13 | Gain |
miR-151a-3p | MIMAT0000757 | 8q24.3 | Gain |
miR-151a-5p | MIMAT0004697 | 8q24.3 | Gain |
miR-15b-3p | MIMAT0004586 | 3q25.33 | Gain and hypomethylation |
miR-16-2-3p | MIMAT0004518 | 3q25.33 | Hypomethylation |
miR-17-3p | MIMAT0000071 | 13q31.3 | Hypomethylation |
miR-17-5p | MIMAT0000070 | 13q31.3 | Hypomethylation |
miR-182-3p | MIMAT0000260 | 7q32.2 | Gain |
miR-186-5p | MIMAT0000456 | 1p31.1 | Gain and loss |
miR-190b | MIMAT0004929 | 1q21.3 | Hypomethylation |
miR-193b-3p | MIMAT0002819 | 16p13.12 | Gain |
miR-19a-3p | MIMAT0000073 | 13q31.3 | Hypomethylation |
miR-19b-3p | MIMAT0000074 | 13q31.3 | Hypomethylation |
miR-200c-3p | MIMAT0000617 | 12p13.31 | Gain and hypomethylation |
miR-200c-5p | MIMAT0004657 | 12p13.31 | Gain |
miR-205-5p | MIMAT0000266 | 1q32.2 | Hypomethylation |
miR-21-3p | MIMAT0004494 | 17q23.1 | Gain |
miR-219-5p | MIMAT0000276 | 6p21.32 | Gain |
miR-29b-2-5p | MIMAT0004515 | 1q32.2 | Gain |
miR-301a-3p | MIMAT0000688 | 17q22 | Gain |
miR-30b-3p | MIMAT0004589 | 8q24.22 | Gain |
miR-30c-2-3p | MIMAT0004550 | 6q13 | Hypomethylation |
miR-30c-5p | MIMAT0000244 | 6q13 | Hypomethylation |
miR-30d-3p | MIMAT0004551 | 8q24.22 | Gain |
miR-30d-5p | MIMAT0000245 | 8q24.22 | Gain |
miR-423-3p | MIMAT0001340 | 17q11.2 | Gain |
miR-423-5p | MIMAT0004748 | 17q11.2 | Gain |
miR-454-3p | MIMAT0003885 | 17q22 | Gain |
miR-484 | MIMAT0002174 | 16p13.11 | Gain |
miR-93-3p | MIMAT0004509 | 7q22.1 | Gain |
miR-93-5p | MIMAT0000093 | 7q22.1 | Gain |
miR-9-3p | MIMAT0000442 | 15q26.1 | Gain |