Skip to main content

Table 2 Metrics for simulating normal contamination in tumor and normal genome FASTA files

From: The genetic heterogeneity and mutational burden of engineered melanomas in zebrafish models

SNP density Type Millions of reads
Normal Tumor content
  30% 60% 100%
0 Normal 8 5.6 3.2 0
  Tumor 0 2.4 4.8 8
0.001 Normal 8 5.6 3.2 0
  Tumor 0 2.4 4.8 8
0.01 Normal 8 5.6 3.2 0
  Tumor 0 2.4 4.8 8
0.1 Normal 8 5.6 3.2 0
  Tumor 0 2.4 4.8 8
0.5 Normal 8 5.6 3.2 0
  Tumor 0 2.4 4.8 8