Table 4 Likelihoods of GAGE assemblies of human chromosome 14
Assembler | Likelihood | Number of reads mapped | Coverage (%) | Scaffold N50 (kb) | Contig N50 (kb) |
|---|---|---|---|---|---|
ABySS | -23.44 × 108 | 22096466 | 82.22 | 2.1 | 2 |
ALLPATHS-LG | -22.77 × 108 | 23122569 | 97.24 | 81647 | 36.5 |
CABOG | -21.26 × 108 | 23433424 | 98.32 | 393 | 45.3 |
SOAPdenovo | a | a | 98.17 | 455 | 14.7 |
Reference | -19.04 × 108 | 23978017 | - | - | - |