Table 4 Results of the predicted enhancers for experimental validation in the Medaka fish reporter assays
Coordinates (hg19) | ID | Enhancer activity | Tissues with patterns | |||
|---|---|---|---|---|---|---|
Chr1 | 39630305 | 39631117 | + | ENH_DISCR_2 | Positive | Tectum, fin |
Chr1 | 27448948 | 27449785 | - | ENH_DISCR_38 | Negative | Â |
Chr2 | 64877588 | 64878573 | - | ENH_DISCR_16 | Negative | Not consistent |
Chr2 | 7025939 | 7026794 | + | ENH_DISCR_18 | Positive | Telencephalon |
Chr2 | 169972473 | 169973432 | - | ENH_DISCR_37 | Positive | Epidermis |
Chr3 | 20009087 | 20009933 | + | ENH_DISCR_14 | Negative | Not consistent |
Chr3 | 71276246 | 71277150 | - | ENH_DISCR_19 | Negative | Not consistent |
Chr3 | 124305687 | 124306362 | + | ENH_DISCR_34 | Positive | Epidermis |
Chr3 | 65590259 | 65591167 | - | ENH_DISCR_41 | Positive | Blood_heart |
Chr3 | 141579681 | 141580471 | + | ENH_DISCR_44 | Weak | Blood |
Chr4 | 109893826 | 109894623 | - | ENH_DISCR_24 | Negative | Not consistent |
Chr6 | 158653651 | 158654413 | + | ENH_DISCR_1 | Negative | Not consistent/heart |
Chr8 | 91239118 | 91239934 | - | ENH_DISCR_17 | Positive | Telencephalon |
Chr8 | 59770666 | 59771377 | - | ENH_DISCR_32 | Positive | Telencephalon |
Chr10 | 97054745 | 97055495 | - | ENH_DISCR_47 | Positive | Epidermis |
Chr12 | 95567438 | 95568125 | - | ENH_DISCR_35 | Positive | Blood, ear |
Chr12 | 755392 | 756170 | - | ENH_DISCR_45 | Weak | Epidermis |
Chr14 | 35805596 | 35806453 | + | ENH_DISCR_21 | Positive | Epidermis, late |
Chr15 | 89638466 | 89639233 | + | ENH_DISCR_12 | Negative | Â |
Chr17 | 46503536 | 46504314 | - | ENH_DISCR_13 | Positive | Telencephalon |
Chr17 | 34953545 | 34954303 | + | ENH_DISCR_22 | Weak | Epidermis, blood |
Chr17 | 73347806 | 73348761 | - | ENH_DISCR_26 | Negative | Not consistent |
Chr17 | 76254538 | 76255291 | + | ENH_DISCR_31 | Weak | Blood |
Chr19 | 33162656 | 33163445 | - | ENH_DISCR_40 | Positive | Blood |
Chr20 | 48293080 | 48293844 | - | ENH_DISCR_48 | Positive | Epidermis, blood |
Chr22 | 28430853 | 28431678 | - | ENH_DISCR_25 | Positive | Tectum |
Chr22 | 21953421 | 21954149 | + | ENH_DISCR_29 | Positive | Telencephalon |