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Table 3 Expanded gene families in the Bathycoccus genome

From: Gene functionalities and genome structure in Bathycoccus prasinos reflect cellular specializations at the base of the green lineage

Gene familya

Copy number in Bathycoccus prasinos

Copy number in Micromonassp. CCMP1545

Copy number in Micromonassp. RCC299

Copy number in Ostreococcus lucimarinus

Copy number in Ostreococcussp. RCC809

Copy number in Ostreococcus tauri

Glycosyl transferase, family 29 (IPR001675)

78

0

1

0

2

0

HOM000519

43

0

0

0

0

0

HOM002813

10

0

0

0

0

0

HOM005062

10

0

0

0

0

0

HOM007941

6

0

0

0

0

0

Ankyrin repeats (IPR020683)

186

124

107

74

55

67

HOM000035

149

56

9

17

6

6

Sialidase/neuraminidase (IPR011040)

23

1

0

0

0

0

HOM002557

17

0

0

0

0

0

HOM005056

5

0

0

0

0

0

Zinc finger, C2H2

53

29

35

19

3

17

HOM000293

48

5

4

1

1

1

  1. aProtein domain description including InterPro identifier. HOM identifiers refer to gene families in pico-PLAZA [62].