Table 5 Non-synonymous SNPs between C57BL6/J and FVB/NJ in Ath11
From: Sequencing and characterization of the FVB/NJ mouse genome
Chromosome 10 position | Ref/FVB | dbSNP ID | MGP | Gene name, Ensembl gene ID and description | Trans. | Protein domain |
|---|---|---|---|---|---|---|
5016217 | G/C | None | 8 | Syne1 ENSMUSG00000019769 Synaptic nuclear envelope 1 | 1/4 | Spectrin repeat |
5380387 | C/A | rs29315913 | 13 | Esr1 ENSMUSG0000001976 Estrogen receptor 1 | 1/5 | Nuclear hormone receptor, ligand-binding, core |
5977100 | A/C | None | 16 | Zbtb2 ENSMUSG00000075327 Zinc finger and BTB domain containing 2 | 2/2 | None |
6338741 | A/G | rs29378605 | 15 | Mthfd1l ENSMUSG00000040675 Methylenetetrahydrofolate dehydrogenase (NAD P+ dependent) 1-like | 3/3 | Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain |
6367833 | A/G | rs29320259 | 14 | Mthfd1l ENSMUSG00000040675 Methylenetetrahydrofolate dehydrogenase (NAD P+ dependent) 1-like | 3/3 | Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain |
7309964 | T/C | rs29376214 | 6 | Lrp11 ENSMUSG00000019796 Low density lipoprotein receptor-related protein 11 | 4/6 | Polycystic Kidney Disease(PKD) domain |
21108744 | A/G | rs49757404 | 12 | Aldh8a1 ENSMUSG00000037542 Aldehyde dehydrogenase 8 family | 1/2 | Aldehyde dehydrogenase domain |
21787374 | C/T | rs47037014 | 8 | 4930444G20Rik ENSMUSG00000069712 RIKEN cDNA 4930444G20 gene | 1/1 | None |
21787451 | A/C | rs50088182 | 9 | 4930444G20Rik ENSMUSG00000069712 RIKEN cDNA 4930444G20 gene | 1/1 | None |
21864292 | C/T | rs49453000 | 8 | E030030I06Rik ENSMUSG00000055657 RIKEN cDNA E030030I06 gene | 1/1 | None |
21868313 | T/C | None | 9 | E030030I06Rik ENSMUSG00000055657 RIKEN cDNA E030030I06 gene | 1/1 | None |
21868315 | T/A | None | 9 | E030030I06Rik ENSMUSG00000055657 RIKEN cDNA E030030I06 gene | 1/1 | None |