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Table 1 Different types of cis-NATs identified in Arabidopsis and rice and cis-NATs that generated cis-nat-siRNAs

From: Genome-wide analysis of plant nat-siRNAs reveals insights into their distribution, biogenesis and function

Type of cis-NAT pairs All pairs All pairs analyzed Pairs with >10 siRNA reads in OR (%)a Pairs with siRNAs only in the OR (%)b Pairs with siRNAs >2-fold enriched in OR (%)b Pairs with siRNAs of strand bias (>2-fold) (%)b
Arabidopsis       
   Convergent 1,126 1,103 23 (2.1%) 5 (21.7%) 9 (37.5%) 13 (54.2%)
   Divergent 142 127 22 (17.3%) 4 (18.2%) 5 (20.0%) 11 (44.0%)
   Enclosed 171 144 39 (27.1%) 7 (17.9%) 10 (23.8%) 22 (52.4%)
   Total 1,439 1,374 84 (6.1%) 16 (19.0%) 24 (26.4%) 46 (50.5%)
Rice       
   Convergent 560 551 68 (12.3%) 20 (29.4%) 31 (45.6%) 36 (52.9%)
   Divergent 100 99 12 (12.1%) 1(8.3%) 3 (25.0%) 4 (33.3%)
   Enclosed 107 107 39 (36.4%) 13 (33.3%) 11 (28.2%) 23 (59.0%)
   Total 767 757 119 (15.7%) 34 (28.6%) 45 (37.8%) 63 (52.9%)
  1. OR, overlap region of a cis-NAT transcript pair. a The percentage of cis-NAT pairs in all cis-NAT pairs analyzed. b The percentage of the specified cis-NAT pairs in the corresponding regions with siRNAs.