Table 2 Correlation of taxonomic abundances produced by MetaPhlAn and Ray Communities
From: Ray Meta: scalable de novo metagenome assembly and profiling
Body site | Samples | Phylum | Class | Order | Family | Genus | Species |
|---|---|---|---|---|---|---|---|
Anterior nares | 45 | 0.91 | 0.92 | 0.94 | 0.94 | 0.59 | 0.59 |
Attached keratinized gingival | 3 | 0.99 | 0.94 | 0.92 | 0.94 | 0.84 | 0.71 |
Buccal mucosa | 46 | 0.99 | 0.98 | 0.97 | 0.98 | 0.95 | 0.91 |
Left retroauricular crease | 3 | 0.99 | 0.99 | 0.99 | 0.99 | 0.72 | 0.83 |
Mid vagina | 1 | 0.99 | 0.99 | 0.99 | 0.99 | 0.99 | 0.90 |
Palatine tonsils | 4 | 0.90 | 0.80 | 0.79 | 0.83 | 0.84 | 0.97 |
Posterior fornix | 23 | 0.99 | 0.99 | 0.99 | 0.99 | 0.97 | 0.94 |
Right retroauricular crease | 6 | 0.94 | 0.92 | 0.93 | 0.94 | 0.83 | 0.91 |
Saliva | 3 | 0.97 | 0.87 | 0.88 | 0.96 | 0.89 | 0.95 |
Stool | 61 | 0.80 | 0.81 | 0.81 | 0.62 | 0.92 | 0.84 |
Subgingival plaque | 5 | 0.86 | 0.75 | 0.76 | 0.74 | 0.81 | 0.93 |
Supragingival plaque | 53 | 0.94 | 0.93 | 0.92 | 0.88 | 0.89 | 0.93 |
Throat | 6 | 0.95 | 0.86 | 0.87 | 0.92 | 0.92 | 0.80 |
Tongue dorsum | 53 | 0.93 | 0.80 | 0.79 | 0.84 | 0.85 | 0.88 |
Vaginal introitus | 1 | 1.00 | 1.00 | 0.99 | 0.99 | 0.99 | 0.97 |
Total | 313 |