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Figure 8 | Genome Biology

Figure 8

From: CHANCE: comprehensive software for quality control and validation of ChIP-seq data

Figure 8

A typical workflow with CHANCE. CHANCE can provide a scientist with feedback regarding the success of their experiment, as well as how their protocols may be improved. CHANCE is designed to work with reads mapped to a reference genome. The dotted pink region illustrates the useful quality metrics computed by CHANCE to assess a ChIP-seq experiment. One can use these intuitive results to determine if the experiment is satisfactory or if additional protocol modification or sequencing is required.

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