BatMeth: improved mapper for bisulfite sequencing reads on DNA methylation

Table 5 Cutoffs for list filtering on simulated reads from the Results section

List size	Mismatch counting in seconds^a	Correct hit	Wrong hit	Total hit
20	136	901,164	1,516	902,680
40	165	901,160	1,462	902,622
60	191	901,165	1,454	902,619
100	279	901,166	1,448	902,614
200	475	901,166	1,447	902,613
500	1,197	901,167	1,450*	902,617
1,000	2,942	901,167	1,450*	902,617

Asterisks indicate increased false-positives produced with large list filtering cutoffs.

ISSN: 1474-760X