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Table 1 Classification of genome-specific sites and SNP sites

From: Targeted analysis of nucleotide and copy number variation by exon capture in allotetraploid wheat genome

Variable sites

Type of mutation

Count

GSS

Non-synonymous

2,925

 

Synonymous

6,850

 

Premature stop codons

26

Derived SNPs in Ld genome

Non-synonymous

485

 

Synonymous

729

 

Premature stop codons

7

 

Stop codon loss

5

Derived SNPs in Td genome

Non-synonymous

363

 

Synonymous

524

 

Premature stop codons

13

 

Stop codon loss

2

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Genome Biology

ISSN: 1474-760X

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