| Sample | |||||||
---|---|---|---|---|---|---|---|---|
 | C57BL/6J | C57BL/6J | 129S1/SvImJ | 129S1/SvImJ | BALB/cJ | BALB/cJ | C3H/HeJ | C3H/HeJ |
Exome version | Alpha | Beta | Alpha | Beta | Alpha | Beta | Alpha | Beta |
Quantitative PCR | 161.81 | 168.53 | 129.43 | 95.75 | 168.92 | 165.08 | 168.38 | 92.00 |
Target exons | 203,225 | 203,224 | 203,225 | 203,224 | 203,225 | 203,224 | 203,225 | 203,224 |
Target bases | 54,367,346 | 54,367,244 | 54,367,346 | 54,367,244 | 54,367,346 | 54,367,244 | 54,367,346 | 54,367,244 |
Target bases covered | 52,266,238 | 53,273,874 | 51,746,839 | 52,508,881 | 51,828,334 | 52,862,662 | 52,136,965 | 51,460,949 |
Percentage target bases covered | 96.14 | 97.99 | 95.18 | 96.58 | 95.33 | 97.23 | 95.90 | 94.65 |
Target bases not covered | 2,101,108 | 1,093,370 | 2,620,507 | 1,858,363 | 2,539,012 | 1,504,582 | 2,230,381 | 2,906,295 |
Percentage target bases not covered | 3.86 | 2.01 | 4.82 | 3.42 | 4.67 | 2.77 | 4.10 | 5.35 |
Median coverage | 18.45 | 20.74 | 17.93 | 16.37 | 18.05 | 20.75 | 18.76 | 7.86 |
Total reads | 60,582,097 | 60,207,746 | 64,258,556 | 44,434,168 | 64,495,816 | 63,740,186 | 64,959,026 | 25,760,946 |
NC80 | 0.28 | 0.37 | 0.25 | 0.33 | 0.25 | 0.31 | 0.29 | 0.32 |
1/NC80 | 3.53 | 2.71 | 4.03 | 3.02 | 3.96 | 3.27 | 3.50 | 3.13 |