Table 1 Quantitative PCR enrichment measurements from 12 clinical samples
From: Hybrid selection for sequencing pathogen genomes from clinical samples
|  | Percentage |  | Parasite [DNA] (pg/μl) |  | |
|---|---|---|---|---|---|
Sample | parasite DNA | WGA | Pre-hybrid selectiona | Post-hybrid selectiona | Fold enrichment |
Th231.08 (round 1) | 0.11 | Yes | 1.8 (0.6) | 71.1 (5.6) | 39.7 |
Th231.08 (round 2) | 7.7 | No | 71.1 (5.6) | 349.1 (74.9) | 4.9 |
Th145.08 | 20 | No | 198.4 (17.4) | 477.6 (66.7) | 2.4 |
Th032.09 | 12 | No | 114.7 (2.9) | 372.6 (59.3) | 3.2 |
Th029.09 | 3 | No | 33.6 (0.8) | 317.3 (54.7) | 9.4 |
Th093.09 | 2.8 | No | 28.5 (1.5) | 365.6 (53.4) | 12.8 |
Th090.08 | 2.3 | No | 37.7 (1.1) | 300.4 (46.9) | 8.0 |
Th139.08 | 2.1 | No | 23.6 (0.6) | 346.2 (50.7) | 14.7 |
Th197.08 | 1.1 | No | 14.6 (0.0) | 222.7 (36.1) | 15.3 |
Th140.08 | 0.99 | No | 9.6 (0.1) | 251.5 (37.4) | 26.2 |
Th190.08 | 0.64 | No | 5.1 (0.2) | 218.7 (34.0) | 43.2 |
Th238.08 | 0.53 | No | 6.7 (0.2) | 273.4 (38.1) | 41.0 |
Th127.09 | 1.6 | No | 26.8 (0.4) | 368.5 (57.1) | 13.7 |
Th175.08 | 48 | Yes | 275.8 (7.2) | 556.9 (79.4) | 2.0 |