Table 3 Overrepresented functional gene categories within the set of genes with a present call in a single hypha
From: Single cell transcriptomics of neighboring hyphae of Aspergillus niger
Number of probe sets | Hypha numbera | |||||
|---|---|---|---|---|---|---|
Functional gene category | 1 | 2 | 3 | 4 | 5 | |
03.01.03 DNA synthesis and replication | 96 | 1 | 0 | 0 | 0 | 0 |
03.01 DNA processing | 240 | 1 | 0 | 0 | 0 | 0 |
05.01 Ribosome biogenesis | 138 | 1 | 1 | 1 | 0 | 1 |
06.13.04 Lysosomal and vacuolar degradation | 32 | 0 | 0 | 1 | 0 | 0 |
06.13 Proteolytic degradation | 198 | 0 | 1 | 1 | 0 | 0 |
08.16.99 Other export and secretion systems | 15 | 0 | 0 | 1 | 1 | 0 |
29.01 LTR retro-elements (retro-viral) | 28 | 0 | 0 | 1 | 0 | 0 |
40.05 Centrosome | 9 | 0 | 0 | 0 | 1 | 0 |
67.04.01.02 Other cation transporters (NA, K, CA, NH4, etc.) | 33 | 0 | 0 | 0 | 1 | 0 |
rRNA | 8 | 1 | 1 | 1 | 1 | 1 |
tRNA | 144 | 1 | 1 | 1 | 1 | 1 |