Table 2 Classification of probe sets with a present call in at least one of the five arrays of a single hypha
From: Single cell transcriptomics of neighboring hyphae of Aspergillus niger
Category | Number of probe sets with a present call | Total number of probe sets | Percentage of probe sets present |
|---|---|---|---|
01 Metabolism | 550 | 3023 | 18.2 |
02 Energy | 25 | 117 | 21.4 |
03 Cell cycle and dna processing | 106 | 476 | 22.3 |
04 Transcription | 116 | 715 | 16.2 |
05 Protein synthesis | 75 | 241 | 31.1 |
06 Protein fate (folding, modification, destination) | 148 | 616 | 24 |
08 Cellular transport and transport mechanisms | 76 | 438 | 17.4 |
10 Cellular communication or signal transduction mechanism | 31 | 179 | 17.3 |
11 Cell rescue, defense and virulence | 52 | 267 | 19.5 |
13 Regulation of or interaction with cellular environment | 8 | 73 | 11 |
14 Cell fate | 15 | 104 | 14.4 |
25 Development (systemic) | 6 | 26 | 23.1 |
29 Transposable elements, viral and plasmid proteins | 12 | 62 | 19.4 |
30 Control of cellular organization | 5 | 29 | 17.2 |
40 Sub-cellular localization | 19 | 137 | 13.9 |
45 Tissue localization | 1 | 2 | 50 |
63 Protein with binding function or co-factor requirement | 1 | 2 | 50 |
67 Transport facilitation | 5 | 44 | 11.4 |
99 Unclassified proteins | 1,279 | 7,670 | 16.7 |
rRNA | 6 | 8 | 75 |
tRNA | 39 | 144 | 27.1 |