Table 3 Differentially expressed kinase transcripts by SAGE
From: The minimal kinome of Giardia lamblia illuminates early kinase evolution and unique parasite biology
ORF | Group | Family | Subfamily | Orthology | Catalytically active? | SAGE cluster | R | Maximum percentage × 1,000 |
|---|---|---|---|---|---|---|---|---|
92498 | Other | Nek | Nek-Unclassified | 1:1:1 | Active | Cysts and excyzoites | 9.56 | 38.5 |
17625 | CMGC | GSK | Â | 1:1:1 | Active | Cysts and excyzoites | 8.30 | 43.4 |
8350 | Other | Nek | Nek-Unclassified | 1:1:1 | Active | Cysts and excyzoites | 9.10 | 44 |
14835 | Other | Nek | Nek-Unclassified | 1:1:1 | Inactive | Cysts and excyzoites | 13.68 | 44 |
11364 | AGC | Akt | Â | 1:1:1 | Active | Cysts and excyzoites | 10.05 | 63.2 |
15397 | CMGC | CDK | CDC2 | 1:1:1 | Active | Cysts and excyzoites | 9.46 | 71.5 |
8805 | Other | SCY1 | Â | 1:1:1 | Inactive | Cysts and excyzoites | 13.93 | 74.3 |
17578 | Other | Nek | Nek-Unclassified | 1:1:1 | Inactive | Cysts and excyzoites | 13.67 | 77 |
91451 | Other | Nek | Nek-Unclassified | 1:1:1 | Active | Cysts and excyzoites | 19.69 | 87.9 |
95593 | Other | Nek | Nek-GL2 | 1:1:1 | Active | Cysts and excyzoites | 16.11 | 92.9 |
3957 | Other | Nek | Nek-Unclassified | 1:1:1 | Active | Cysts and excyzoites | 25.71 | 109.9 |
114307 | Other | Nek | Nek-GL1 | 1:1:1 | Active | Cysts and excyzoites | 24.87 | 111.5 |
22451 | Other | Nek | Nek-Unclassified | 1:1:1 | Inactive | Cysts and excyzoites | 44.93 | 255.6 |
113456 | Other | VPS15 | Â | 1:1:1 | Active | Differentiation | 9.40 | 75.2 |
101307 | Other | Nek | Nek-GL1 | 3:1:1 | Active | Trophozoites and encyzoites | 10.11 | 37.8 |
86934_mod | Other | Nek | Nek-GL1 | 3:1:1 | Active | Trophozoites and encyzoites | 10.11 | 37.8 |
16943 | Other | Nek | Nek-Unclassified | 1:1:1 | Inactive | Trophozoites and encyzoites | 11.98 | 39.7 |
3677 | Other | Nek | Nek-GL4 | 1:1:1 | Active | Trophozoites and encyzoites | 10.31 | 54 |
113030 | Other | Nek | Nek-GL4 | 1:1:1 | Inactive | Trophozoites and encyzoites | 10.14 | 59.9 |
5346 | Other | Nek | Nek-Unclassified | 1:1:1 | Active | Trophozoites and encyzoites | 10.59 | 75.6 |
101534 | Other | Nek | Nek-GL4 | C | Active | Trophozoites and encyzoites | 18.41 | 75.6 |
16824 | Other | Nek | Nek-Unclassified | 1:1:1 | Inactive | Trophozoites and encyzoites | 8.76 | 81.5 |
90343 | Other | WNK | Â | 1:1:1 | Active | Trophozoites and encyzoites | 11.42 | 105.2 |
114495_mod | Other | Nek | Nek-GL4 | C | Pseudogene | Trophozoites and encyzoites | 27.04 | 174.5 |
24321 | Other | Nek | Nek-Unclassified | 1:1:1 | Inactive | Trophozoites and encyzoites | 36.42 | 213.2 |
15409 | Other | Nek | Nek-Unclassified | 1:0:2 | Inactive | Trophozoites and encyzoites | 35.87 | 507.4 |