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Table 3 Context and effect of alleles observed in the six heteroplasmic sites

From: Dynamics of mitochondrial heteroplasmy in three families investigated via a repeatable re-sequencing study

     

Reference

 

Mutated

  

Position

Type

11 bases prior to mutation site

Reference base

Strand

Codon

Amino acid

Codon position

Codon

Amino acid

S/N

Gene

5,063

DN (germline), FS (germline)

CCGTACAACCC

T

+

cct

Pro

3rd

ccc

Pro

S

NADH dehydrogenase subunit 2

7,028

FS (somatic)

TACGTTGTAGC

T

+

ggt

Gly

3rd

ggc

Gly

S

Cytochrome c oxidase subunit I

8,992

FS (germline)

AACCAATAGCC

C

+

ctg

Leu

1st

ttg

Leu

S

ATP synthase 6; ATPase subunit 6

14,053

WS

ACCAAATCTCC

A

+

acc

Thr

1st

ccc

Pro

N

NADH dehydrogenase, subunit 5

  1. DN, de novo mutation; FS, allele frequency shift; WS, without allele frequency shift; N, nonsynonymous substitutions; S, synonymous substitutions.