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Table 5 Summary of parameter estimates and significance levels of the multivariate generalized linear regression analysis for CpH transition rate

From: Substitution rate variation at human CpG sites correlates with non-CpG divergence, methylation level and GC content

  Dataset A Dataset B Dataset C
  Estimate -log10(p) Estimate -log10(p) Estimate -log10(p)
Divergence 0.2559 > 15.70 0.2205 > 15.70 0.2094 > 15.70
Methylation level 0 0 0.0036 1.34 0.0032 0.52
GC content -0.1366 > 15.70 -0.1389 > 15.70 -0.1681 > 15.70
Transcription level 0.0084 3.08 0.0065 6.09 0.0063 1.59
Female recombination rate 0.0048 1.15 0.0002 0.04 0.0019 0.27
Male recombination rate 0.0083 2.71 0.0046 2.91 0.0014 0.19
Explained deviance 10,790 24,947 6,639
Residual deviance 7,407 12,664 2,427
na 13,038 21,636 3,871
AICb 60,968 113,273 21,181
  1. Dataset A contains no CpG islands (CGIs) or DNase I hypersensitive sites (DHSs)), dataset B contains DHSs but no CGIs, and dataset C contains both CGIs and DHSs. aSample size. bAkaike Information Criterion.