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Table 3 The major classes of transposable elements found in the Trichoderma genomes

From: Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma

 

T. atroviridae

T. reesei

T. virens

Class

Copy number

Total length (bp)

Copy number

Total length (bp)

Copy number

Total length (bp)

DNA

372

39,899

446

50,448

370

52,358

LTR

533

64,534

559

76,482

541

67,484

Helitrons

40

9,235

45

9,962

34

8,547

LINE

561

65,202

530

54,928

349

59,414

Totala

 

178,870 (0.49%)

 

191,820 (0.57%)

 

187,803 (0.48%)

  1. aTotal in base pairs and percentage of genome of transposable elements found in the genomes. LINE, long interspersed nuclear element; LTR, long terminal repeat.