Table 1 Genome assembly and annotation statistics
| Â | T. atroviride | T. virens | T. reesei |
|---|---|---|---|
Genome size, Mbp | 36.1 | 38.8 | 34.1 |
Coverage | 8.26× | 8.05× | 9.00× |
Assembly gaps, Mbp | 0.1 (0.16%) | 0.2(0.4%) | 0.05 (0.1%) |
Number of scaffolds | 50 | 135 | 89 |
Number of predicted genes | 11865 | 12518 | 9143 |
Gene length, bp | 1747.06 | 1710.05 | 1793,25 |
Protein length, amino acids | 471.54 | 478.69 | 492,27 |
Exons per gene | 2,93 | 2,98 | 3,06 |
Exon length, bp | 528.17 | 506.13 | 507,81 |
Intron length, bp | 104.20 | 104.95 | 119,64 |
Supported by homology, NR | 10,219 (92%) | 10,915 (94%) | 8409 (92%) |
Supported by homology, Swissprot | 8,367(75%) | 8,773 (75%) | 6763 (74%) |
Has PFAM domain | 5,883 (53%) | 6,267 (54%) | 5096 (56%) |