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Table 1 Genome assembly and annotation statistics

From: Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma

  T. atroviride T. virens T. reesei
Genome size, Mbp 36.1 38.8 34.1
Coverage 8.26× 8.05× 9.00×
Assembly gaps, Mbp 0.1 (0.16%) 0.2(0.4%) 0.05 (0.1%)
Number of scaffolds 50 135 89
Number of predicted genes 11865 12518 9143
Gene length, bp 1747.06 1710.05 1793,25
Protein length, amino acids 471.54 478.69 492,27
Exons per gene 2,93 2,98 3,06
Exon length, bp 528.17 506.13 507,81
Intron length, bp 104.20 104.95 119,64
Supported by homology, NR 10,219 (92%) 10,915 (94%) 8409 (92%)
Supported by homology, Swissprot 8,367(75%) 8,773 (75%) 6763 (74%)
Has PFAM domain 5,883 (53%) 6,267 (54%) 5096 (56%)
  1. NR, non-redundant database; PFAM, protein families.