Table 5 Genes not affected by treatment
From: Genome-wide assessment of imprinted expression in human cells
| Â | Â | Â | 19099 | 19141 | Â | Â | ||
|---|---|---|---|---|---|---|---|---|
Gene | Transcript | Location | Untreated | Treated | Untreated | Treated | IBD | Mapped to polymorphism |
MARK1 | NM_018650 | chr1:218867493-218900613 | Â | Â | 6.38 | 6.26 | Yes | Â |
DISC1 | NM_001012957 | chr1:229837731-230086433 | Â | Â | 4.64 | 4.85 | Yes | Yes |
CYP27A1 | NM_000784 | chr2:219372907-219379842 | 3.84 | 2.54 | 1.25 | 1.62 | NI | Â |
THNSL2 | NM_018271 | chr2:88252911-88265923 | 2.43 | 3.37 | Â | Â | Yes | Yes |
PTPRG | NM_002841 | chr3:62165281-62250653 | 4.02 | 3.09 | 3.65 | 5.10 | NI | Â |
UPK1B | NM_006952 | chr3:120375223-120399317 | 4.12 | 3.68 | 1.23 | 1.33 | NI | Â |
FAM53A | NM_001013622 | chr4:1654935-1655009 | 1.93 | 2.04 | 2.30 | 2.13 | Yes | Â |
EVC | NM_153717 | chr4:5767823-5801057 | 1.68 | 1.78 | 3.47 | 3.11 | Yes | Â |
- | Â | chr4:6698225-6722860 | Â | Â | 3.9 | 3.99 | Yes | Yes |
- | Â | chr4:107011829-107032181 | Â | Â | 4.34 | 4.27 | NI | Â |
- | Â | chr4:142529192-142768065 | 5.11 | 5.47 | Â | Â | Yes | Yes |
ANKH | NM_054027 | chr5:14801236-14922709 | 1.42 | 1.35 | 7.59 | 8.63 | Yes | Yes |
- | Â | chr5:82347320-82386566 | Â | Â | 2.1 | 2.23 | Yes | Yes |
- | Â | chr6:654765-656792 | 3.18 | 3.13 | Â | Â | NA | Â |
MOXD1 | NM_015529 | chr6:132659162-132759924 | 2.02 | 2.08 | 3.07 | 3.03 | Yes | Yes |
- | Â | chr8:511306-580861 | 3.54 | 2.76 | 2.33 | 2.79 | Yes | Yes |
- | Â | chr9:5296824-5301171 | Â | Â | 3.83 | 3.91 | Yes | Â |
DEC1 | NM_017418 | chr9:117025707-117204395 | 2.22 | 2.18 | Â | Â | Yes | Yes |
DIP2C | NM_014974 | chr10:363048-477973 | 3.56 | 2.48 | 1.25 | 1.73 | Yes | Â |
FRMD4A | NM_018027 | chr10:13817200-14106528 | Â | Â | 3.93 | 4.13 | NA | Â |
- | Â | chr11:6879025-6898447 | 2.81 | 2.20 | 1.63 | 2.15 | Yes | Yes |
- | Â | chr11:70187425-70240934 | 2.73 | 2.13 | 1.52 | 1.83 | NI | Â |
- | Â | chr13:18766583-18804422 | 3.50 | 3.03 | 3.52 | 4.30 | Yes | Yes |
WDR51B | NM_172240 | chr12:88415605-88431297 | 2.18 | 2.27 | 2.66 | 2.62 | Yes | Yes |
- | Â | chr14:24047434-24096337 | 2.44 | 2.01 | 4.27 | 5.26 | NI | Â |
PAX9 | NM_006194 | chr14:36198687-36216226 | 1.98 | 1.51 | 2.06 | 2.63 | Yes | Â |
- | Â | chr14:69730226-69746414 | Â | Â | 5.76 | 5.81 | NA | Â |
DPF3 | NM_012074 | chr14:72343297-72429399 | 1.83 | 2.39 | 3.30 | 2.29 | Yes | Â |
WARS | NM_173701 | chr14:99906106-99911812 | 2.49 | 2.41 | Â | Â | Yes | Yes |
- | Â | chr15:22775434-22933834 | 11.24 | 9.95 | 7.06 | 8.26 | Yes | Â |
- | Â | chr15:28921438-28971039 | 11.73 | 7.79 | 2.13 | 2.70 | Yes | Yes |
SV2B | NM_014848 | chr15:89614733-89637888 | 2.88 | 2.74 | Â | Â | NI | Â |
- | Â | chr16:53974720-54069307 | 5.38 | 2.88 | 1.10 | 1.64 | Yes | Yes |
- | Â | chr16:83152950-83155553 | Â | Â | 3.52 | 3.6 | NA | Â |
SLC13A5 | NM_177550 | chr17:6531791-6555012 | Â | Â | 3.75 | 3.89 | NA | Â |
- | Â | chr17:34566422-34580691 | 2.65 | 2.28 | 1.56 | 1.78 | NA | Â |
PITPNC1 | NM_181671 | chr17:63031387-63046267 | 3.08 | 2.46 | 1.59 | 1.83 | Yes | Â |
DSC3 | NM_024423 | chr18:26824546-26875293 | 1.88 | 2.21 | 4.83 | 3.67 | Yes | Yes |
KATNAL2 | NM_031303 | chr18:42780796-42812910 | 1.97 | 1.83 | 2.41 | 2.60 | NI | Â |
- | Â | chr19:40008284-40033757 | 6.05 | 5.53 | 4.29 | 4.95 | NI | Â |
SIGLEC5 | NM_003830 | chr19:56807457-56823545 | 1.45 | 1.24 | 3.84 | 5.51 | NI | Â |
- | Â | chr19:58776466-58798723 | 3.02 | 3.32 | Â | Â | Yes | Â |
- | Â | chr22:22567862-22619365 | 1.12 | 1.03 | 8.09 | 10.02 | Yes | Yes |
LDOC1L | NM_032287 | chr22:43268050-43270537 | 1.46 | 1.75 | 3.74 | 2.97 | Yes | Â |