| Total length (Mb) | Number | N50a (bp) | N90a (bp) | Longest (bp) |
---|
Contigb | 515.56 | 60,796 | 14,708 | 4,079 | 137,874 |
Scaffoldb | 516.46 | 31,822 | 30,195 | 7,299 | 238,094 |
Super-scaffoldb | 516.47 | 26,446 | 42,632 | 8,441 | 400,764 |
- aThe N50 and N90 sizes of contigs or scaffolds were calculated by ordering all sequences and then adding the lengths from the longest to the shortest until the summed length exceeded 50% and 90% of the total length of all sequences, respectively. bContigs and scaffolds were constructed by Celera, while contigs were continuous sequence fragment without gaps (Ns). Super-scaffolds were built with RNA-seq data by RNAPATH based on the scaffolds.