|
Genomic DNA, Illumina 2 × 100 bp paired-end reads
|
|
CS-PK_SIL-1a
|
181
|
143,951,601
|
28.0
|
124,499,863
|
23.8
|
82.2
|
|
CS-PK_SIL-1b
|
195
|
111,106,936
|
22.2
|
98,124,711
|
19.0
|
82.4
|
|
CS-PK_SIL-2a
|
313
|
93,774,355
|
18.8
|
81,421,333
|
15.3
|
84.7
|
|
CS-PK_SIL-3b
|
362
|
66,932,319
|
13.4
|
60,519,955
|
11.6
|
82.8
|
|
CS-PK_SIL-B
|
664
|
95,648,778
|
19.1
|
49,550,098
|
9.2
|
85.1
|
|
CS-PK_SIL-C
|
580
|
101,329,142
|
20.3
|
72,977,620
|
13.6
|
87.1
|
|
Genomic DNA, Illumina 2 × 44 bp mate pair reads
|
|
CS-PK_2 kb-1a
|
1,926
|
36,057,086
|
3.2
|
24,688,690
|
2.2
|
75.0
|
|
CS-PK_2 kb-1b
|
1,846
|
32,385,628
|
2.8
|
24,405,458
|
2.1
|
76.8
|
|
CS-PK_2 kb-2a
|
1,850
|
37,761,064
|
3.3
|
29,927,921
|
2.6
|
75.5
|
|
CS-PK_2 kb-2b
|
1,787
|
37,111,622
|
3.3
|
28,744,604
|
2.5
|
77.1
|
|
CS-PK_5 kb-1
|
4,721
|
36,182,230
|
3.2
|
27,377,398
|
2.4
|
77.5
|
|
CS-PK_5 kb-2
|
4,585
|
64,613,144
|
5.7
|
50,712,974
|
4.4
|
79.9
|
|
Genomic DNA, 454 mate pairs
|
|
CS-PK_8 kb-1
|
8,000
|
557,443
|
0.20
|
192,483
|
0.069
|
77.0
|
|
CS-PK_8 kb-2
|
8,000
|
484,033
|
0.17
|
176,405
|
0.063
|
74.5
|
|
CS-PK_8 kb-3
|
8,000
|
603,780
|
0.21
|
221,616
|
0.079
|
78.6
|
|
CS-PK_13 kb-1
|
13,000
|
430,642
|
0.11
|
96,503
|
0.030
|
75.1
|
|
CS-PK_20 kb-1
|
20,000
|
611,986
|
0.19
|
216,379
|
0.070
|
77.0
|
|
CS-PK_20 kb-2
|
20,000
|
575,618
|
0.21
|
228,811
|
0.081
|
77.0
|
|
CS-PK_30 kb-1
|
30,000
|
644,026
|
0.22
|
239,625
|
0.082
|
72.8
|
|
CS-PK_30 kb-2
|
30,000
|
536,273
|
0.15
|
150,510
|
0.048
|
73.4
|
|
CS-PK_40 kb-1
|
40,000
|
213,928
|
0.06
|
64,325
|
0.019
|
74.9
|
|
CS-PK_40 kb-2
|
40,000
|
627,945
|
0.21
|
241,189
|
0.079
|
76.8
|
|
CS-PK_40 kb-3
|
40,000
|
573,313
|
0.19
|
224,264
|
0.073
|
74.5
|
|
RNA, Illumina 1 × 100 bp single-end reads
|
|
PK-Mid-flower
|
-
|
37,835,287
|
3.8
|
25,687,331
|
2.3
|
-
|
|
PK-Early-flower
|
-
|
37,472,665
|
3.7
|
25,434,724
|
2.3
|
-
|
|
PK-Pre-flower
|
-
|
54,026,640
|
5.4
|
35,522,980
|
3.2
|
-
|
|
PK-Shoot
|
-
|
55,653,984
|
5.6
|
36,204,828
|
3.3
|
-
|
|
PK-Stem
|
-
|
60,353,149
|
6.0
|
39,274,463
|
3.5
|
-
|
|
PK-Root
|
-
|
37,374,640
|
3.7
|
24,904,927
|
2.2
|
-
|
|
RNA, Illumina 2 × 100 bp paired-end reads
|
|
PK-subtracted1
|
180
|
110,483,894
|
22.1
|
64,525,082
|
11.6
|
-
|
|
PK-subtracted2
|
180
|
82,190,044
|
16.4
|
46,291,148
|
8.3
|
-
|
|
PK-subtracted3
|
180
|
105,737,119
|
21.1
|
61,974,962
|
11.2
|
-
|
|
PK-subtracted4
|
180
|
48,599,953
|
9.7
|
26,505,457
|
4.8
|
-
|
