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Table 2 Protein families implicated in plant pathogenesis: P. ultimum versus Phytophthora spp. or diatoms

From: Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire

  P. ultimum Ph. infestans Ph. sojae Ph. ramorum Thalassiosira pseudonana(diatom) Phaeodactylum tricornutum(diatom)
ABC transportersa 140 137 141 135 57 65
Aspartyl protease families A1, A8b 29 16 16 18 ND 8
Crinklers (CRN-family)a 26 196 100 19 0 0
Cutinasec 0 4 13 4 0 ND
Cysteine protease families C1, C2, C56a 42 38 33 42 ND 11
Cytochrome P450sb 41 28 31 31 ND 10
Elicitin-like proteinsd 24 40 57 50 0 0
Glycoside hydrolasesc 180 277 301 258 59 ND
Lipasesd 31 19 27 17 22 17
NPP1-like proteins (necrosis-inducing proteins)d 7 27 39 59 0 0
PcF/SCR-liked 3 16 8 1 0 0
Pectin esterasesc 0 13 19 11 0 ND
Polysaccharide lyasesc 29 67 54 49 0 ND
Phospholipasesd 20 36 31 28 18 11
Protease inhibitors, alld 43 38 26 18 11 5
RXLR effectorsa 0 563 350 350 0 0
Serine protease families S1A, S8, S10b 85 60 63 57 ND 31
  1. aData from manual curation/analyses. bData from PANTHER family analyses (MEROPS classification). cData from CAZy. dData from analysis of TRIBEMCL families. ND, not determined.