Table 3 Average fold changes of genes, exons, and junctions of chromosome 1
From: Modeling non-uniformity in short-read rates in RNA-Seq data
| Â | Average fold changes of mean sequencing preferences | |||
|---|---|---|---|---|
Dataset used to train the model | Genes | Exons | Junctions (read length = 35) | Junctions (read length = 100) |
Wold | 1.02 | 1.12 | 1.13 | 1.07 |
Burge | 1.18 | 1.32 | 1.37 | 1.28 |
Grimmond | 1.25 | 2.17 | 2.34 | 1.73 |