From: Modeling non-uniformity in short-read rates in RNA-Seq data
R 2 | |||||
---|---|---|---|---|---|
Poisson linear | MART | ||||
Dataset | Sub-dataset | 80 nucleotidesa, non-cross-validation | 80 nucleotidesa, cross-validation | 40 nucleotidesa, cross-validation | 40 nucleotidesa, cross-validation |
Wold | Brain | 0.52 | 0.51 | 0.51 | 0.70 |
Liver | 0.51 | 0.50 | 0.50 | 0.70 | |
Muscle | 0.48 | 0.46 | 0.46 | 0.59 | |
Burge | Group 1 | 0.43 | 0.42 | 0.42 | 0.52 |
Group 2 | 0.37 | 0.35 | 0.35 | 0.46 | |
Group 3 | 0.45 | 0.42 | 0.42 | 0.54 | |
Grimmond | EB | 0.47 | 0.40 | 0.40 | 0.58 |
ES | 0.45 | 0.39 | 0.37 | 0.54 |