| E. coli | S. aureus | S. pyogenes | |||
---|---|---|---|---|---|---|
Number of genomes aligned | 5 | 25 | 5 | 11 | 5 | 12 |
Total number of loci | 1,037 | 1,553 | 768 | 970 | 344 | 570 |
Number of microdiversity loci (M) | 640 (62%)a | 852 (55%) | 556 (72%) | 715 (74%) | 250 (73%) | 385 (67%) |
Insertions/M | 7.03% | 3.99% | 3.6% | 1.12% | 4.8% | 5.71% |
Deletions/M | 4.22% | 4.69% | 4.68% | 4.48% | 12.4% | 10.91% |
Insertions or deletions/M | 3.59% | 0.47% | 3.24% | 2.66% | 0.8% | 0% |
Dimorphs/M | 37.97% | 23.71% | 42.63% | 52.03% | 31.6% | 22.34% |
Homeologous/M | 30.31% | 45.89% | 22.84% | 23.5% | 19.6% | 27.53% |
Polymorphs/M | 16.88% | 21.24% | 23.02% | 16.22% | 30.8% | 33.51% |