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Figure 4 | Genome Biology

Figure 4

From: Global and unbiased detection of splice junctions from RNA-seq data

Figure 4

SplitSeek results viewed in the UCSC genome browser. (a) Predicted splice junctions in the gene Fpgs. (b) The two grey boxes give a schematic view of how deletions and insertions are detected. The genome browser image below shows the SplitSeek results in the last exon and 3' UTR of the Nol10 gene on chromosome 12. Three events are predicted, a splice junction (to the left), a deletion (in the middle,) and an insertion (to the right). The predicted insertion and deletion are both supported by the mRNA AK148210, as indicated by the orange arrows at the bottom.

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