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Table 3 Gene Ontology annotation for homoeolog-biased genes in the Arabidopsis suecica genome, overrepresented unless stated

From: Homoeolog-specific retention and use in allotetraploid Arabidopsis suecica depends on parent of origin and network partners

Classification

Biological process

P-value

At-like

Sulfur amino acid metabolic process

0.00078

 

Response to fungus

0.0054

 

Heat acclimation

0.0054

 

Aspartate family amino acid metabolic process

0.012

 

mRNA metabolic process

0.012

 

Riboflavin biosynthetic process

0.013

 

Membrane lipid metabolic process

0.013

 

Cellular sodium ion homeostasis

0.013

 

Cellular calcium ion homeostasis

0.021

 

Aspartate family amino acid metabolic process

0.024

 

Purine ribonucleoside monophosphate metabolic process

0.035

 

Cellular potassium ion homeostasis

0.036

Aa-like

Protein amino acid glycosylation

0.021

 

Defense response, underrepresented

0.029

 

DNA repair

0.024

 

Response to DNA damage stimulus

0.024

 

RNA metabolic process

0.028

 

Cell communication, underrepresented

0.031

 

Signal transduction, underrepresented

0.033

 

Hormone transport

0.044

 

Microtubule cytoskeleton organization

0.044