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Table 1 Number of clusters of orthologous genes

From: Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species

 

S. pneumoniae

S. pneumoniae , S. mitis, S. oralis, S. infantis

S. pneumoniae , S. mitis, S. oralis, S. infantis, S. Sanguinis, S. pyogenes

Number of genes

3,221

4,904

7,031

Core

1,666 (52%)

1,111 (23%)

522 (7%)

Dispensable

1,555 (48%)

3,793 (77%)

6,509 (93%)

Strain-specific

389 (12%)

1,565 (32%)

3,552 (51%)

  1. We report the total number of clusters of orthologous genes and the number of core, dispensable (that is, missing in at least one strain), and strain-specific genes for S. pneumoniae alone, for S. pneumoniae, S. mitis, S. oralis, and S. infantis, and for S. pneumoniae, S. mitis, S. oralis, S. infantis, S. sanguinis and S. pyogenes.
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Genome Biology

ISSN: 1474-760X

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