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Table 3 Summary of BLASTX search analysis of catfish ESTs

From: Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies

Database Catfish hits* Unique protein % of total unique proteins Unique gene
NR 41,311 22,642   
Uniprot 34,860 17,948   
Refseq/Ensembl     
   Zebrafish 39,546 14,988 54% of 27,996 12,470
   Medaka 36,641 13,588 56% of 24,461 12,920
   Tetraodon 34,418 13,132 57% of 23,118 10,322
   Human 33,847 12,621 33% of 38,342 9,668
   Mouse 33,594 12,267 35% of 35,236 11,518
   Chicken 31,646 11,059 50% of 22,194 8,717
Cumulative unique (E-10) 42,668 16,439   14,776
  1. *Number of significant (E-10) alignments using all catfish unique sequences as queries to search the listed databases. Cumulative unique totals were derived from the sum of unique gene/protein identities across all listed species.