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Table 3 Distribution of common repeat sequences

From: Genomic characterization of the Yersinia genus

  ERIC (127 bp) YPAL (167 bp) Kristensenii39 (142 bp) IS1541C (708 bp) Aldovae3 (154 bp)
E. coli 0 3 5 0 5
Y. pestis 54 43 33 61 38
Y. pseudotuberculosis 55 52 29 5 36
Y. enterocolitica 63 144 100 3 75
Y. aldovae 6 84 46 0 40
Y. bercovieri 9 45 6 9 13
Y. frederiksenii 0 57 6 0 5
Y. intermedia 2 91 48 0 43
Y. kristensenii 2 99 70 0 59
Y. mollaretii 6 62 26 0 20
Y. rohdei 0 37 8 0 7
Y. ruckeri 45 2 0 0 2
  1. Three of the repeat sequences found using de novo searches matched the known repeat elements ERIC, YPAL, and IS1541C and are identified as such. Kristensenii39 and Aldovae3 are elements found from de novo searches in the Y. kristensenii and Y. aldovae genomes, respectively.