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Table 3 Clustering coefficient of different Gene Ontology pathways in A. thaliana

From: Reverse-engineering the Arabidopsis thaliana transcriptional network under changing environmental conditions

GO pathways Clustering coefficient* Number of connected genes Number of genes
Auxin metabolic process 0.643 7 31
Response to heat 0.455 44 93
Hydrogen transport 0.335 20 54
Gravitropism 0.250 8 24
Alcohol biosynthetic process 0.233 5 18
Response to salt stress 0.204 87 148
Systemic acquired resistance 0.201 12 21
Immune response 0.190 55 112
Cell morphogenesis 0.153 72 156
Response to other organism 0.105 92 147
Response to bacterium 0.099 34 87
Response to light stimulus 0.088 138 246
  1. *The clustering coefficient for the random subnetworks is 0.005, as computed from 10 subsets of 100 genes each.