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Table 2 Polymorphisms on chromosome IV, positions 8,805 to 8,907, where TgCkUg2 and several Ugandan type II strains shared allelic variants with GT1 (type I)

From: Whole genome sequencing of a natural recombinant Toxoplasma gondiistrain reveals chromosome sorting and local allelic variants

Locus

IV-8

Me49 (II)

T

C

T

A

T

T

G

G

A

G

G

G

A

A

G

T

VEG (III)

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

TgCkUg6

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

TgCkUg5

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

TgCkUg9

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

TgCkUg7

*

*

A

T

C

C

C

*

*

T

*

*

G

C

C

*

TgCkUg1

C

A

A

T

C

C

C

C

C

T

A

A

G

C

C

A

TgCkUg2

C

A

A

T

C

C

C

C

C

T

A

A

G

C

C

A

TgCkUg3

C

A

A

T

C

C

C

C

C

T

A

A

G

C

C

A

TgCkUg8

C

A

A

T

C

C

C

C

C

T

A

A

G

C

C

A

GT1 (I)

C

A

A

T

C

C

C

C

C

T

A

A

G

C

C

A

  1. Similarities to the Me49 sequence are indicated by an asterisk.