Parallel RNAi screens across different cell lines identify generic and cell type-specific regulators of actin organization and cell morphology

Table 1 Correlation of microarray and RNAi hit profiles across cell lines

	Kc	S2	S2R+	BG3-c1	BG3-c2	BG2-c2
Kc		0.36	0.25	0.05	0.16	0.14
S2	*0.56*		0.44	0.03	0.21	0.12
S2R+	*0.52*	*0.30*		-0.01	0.08	0.03
BG3-c1	0.01	0.21	-0.07		0.25	0.29
BG3-c2	0.00	0.17	-0.20	*0.50*		0.42
BG2-c2	-0.09	0.07	-0.10	*0.50*	*0.63*

Corrrelation of microarray and RNAi hit profiles across cell lines. The similarities between microarray gene expression profiles (non-italic, top right section) and RNAi hit profiles (italic, bottom left section) of 6 different cell lines as measured using a Pearson correlation coefficient. Perfect correlation = 1, no correlation = 0. Entries in bold show the highest correlation, indicating that in both the microarray and RNAi data, cells with similar origins are most similar to each other.

ISSN: 1474-760X