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Table 1 Correlation of microarray and RNAi hit profiles across cell lines

From: Parallel RNAi screens across different cell lines identify generic and cell type-specific regulators of actin organization and cell morphology

  Kc S2 S2R+ BG3-c1 BG3-c2 BG2-c2
Kc   0.36 0.25 0.05 0.16 0.14
S2 0.56   0.44 0.03 0.21 0.12
S2R+ 0.52 0.30   -0.01 0.08 0.03
BG3-c1 0.01 0.21 -0.07   0.25 0.29
BG3-c2 0.00 0.17 -0.20 0.50   0.42
BG2-c2 -0.09 0.07 -0.10 0.50 0.63  
  1. Corrrelation of microarray and RNAi hit profiles across cell lines. The similarities between microarray gene expression profiles (non-italic, top right section) and RNAi hit profiles (italic, bottom left section) of 6 different cell lines as measured using a Pearson correlation coefficient. Perfect correlation = 1, no correlation = 0. Entries in bold show the highest correlation, indicating that in both the microarray and RNAi data, cells with similar origins are most similar to each other.