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Table 2 Set of selected tags and ratios between SAGE libraries

From: Identification of novel transcripts with differential dorso-ventral expression in Xenopus gastrula using serial analysis of gene expression

ID Dorsal frequency Ventral frequency Normalized ratio* p-value eSAGE
DV01 34 2 17.5 6.65 e-9
DV02 20 1 20.6 8.53 e-6
DV03 0 15 -14.6 3.8 e-5
DV04 18 2 9.3 0.0001
DV05 20 3 6.9 0.0002
DV06 11 0 11.3 0.0004
DV07 9 0 9.3 0.0017
DV08 9 0 9.3 0.0017
DV09 11 1 11.3 0.0030
DV10 8 0 8.2 0.0035
DV11 8 0 8.2 0.0035
DV12 13 2 6.7 0.0036
DV13 1 11 -10.7 0.0039
DV14 0 8 -7.8 0.0044
DV15 0 8 -7.8 0.0044
DV16 10 1 10.3 0.0056
DV17 12 2 6.2 0.0064
DV18 12 2 6.2 0.0064
DV22 1 10 -9.7 0.0072
DV25 2 12 -5.8 0.0086
DV38 1 9 -8.8 0.0132
  1. The first 18 tags of the list of tags with significant differential frequency of occurrence between libraries are shown (ordered by increasing p-value). Three additional ventral tags are also included (DV22, DV25 and DV38). *Normalized ratio is the ratio of relative dorsal and ventral frequencies, considering 31,175 total dorsal tags and 32,047 total ventral tags. Negative numbers indicate a higher ventral frequency. p-value given by the eSAGE software for the differential expression of each tag between both SAGE libraries.