Table 2 TRANSFAC motifs enriched near HighOc sites relative to LowOc and MedOc sites combined
Transcription factor | TRANSFAC PWM ID | Fold enrichment | Fisher P-value | FDR |
|---|---|---|---|---|
COUPTF | M01036 | 1.57 | 0 | 0 |
HES1 | M01009 | 1.48 | 0 | 0 |
AP-2gamma | M00470 | 1.35 | 0 | 0 |
LXR | M00647 | 1.31 | 0 | 0 |
AP-2 | M00915 | 1.27 | 0 | 0 |
HIC1 | M01073 | 1.25 | 1.00E-06 | 3.75E-05 |
LRF | M01100 | 1.19 | 0.000128 | 0.00335 |
CACCC-binding_factor | M00721 | 1.26 | 0.000133 | 0.00335 |
HIC1 | M01072 | 1.19 | 0.000134 | 0.00335 |
GCM | M00634 | 1.36 | 0.000231 | 0.005198 |
Sp1 | M00931 | 1.24 | 0.000303 | 0.006198 |
CBF_(core_binding_factor) | M01080 | 1.22 | 0.000868 | 0.016275 |
AP-2alphaA | M01045 | 1.19 | 0.001479 | 0.025598 |
ZID | M00085 | 1.25 | 0.002197 | 0.035309 |
YY1 | M00069 | 1.19 | 0.004876 | 0.07314 |
ZF5 | M00716 | 1.11 | 0.006835 | 0.096117 |