From: High resolution discovery and confirmation of copy number variants in 90 Yoruba Nigerians
 | Putative CNVs | High conf | Singleton | CBS all probes | CBS smoothed | Confirmed CNVs | Confirmed high conf | Confirmed singleton |
---|---|---|---|---|---|---|---|---|
Parent set | Â | Putatives | Putatives | Putatives | Putatives | Putatives | Putative high conf | Putative singleton |
Number of CNVs | 6,578 | 3,850 | 2,728 | 5,842 | 736 | 6,368 | 3,799 | 2,569 |
% of parent set | Â | 58.5% | 41.5% | 88.8% | 11.2% | 96.8% | 98.7% | 94.2% |
Median length | 4.9 kb | 5.9 kb | 3.7 kb | 4.0 kb | 70.7 kb | 4.4 kb | 5.3 kb | 3.1 kb |
   25th percentile | 1.7 kb | 2.3 kb | 1.1 kb | 1.5 kb | 48.5 kb | 1.5 kb | 2.1 kb | 1.0 kb |
   75th percentile | 15.7 kb | 19.0 kb | 12.0 kb | 9.8 kb | 105.9 kb | 13.2 kb | 16.8 kb | 9.1 kb |
DGV overlap | 3,780 | 2,587 | 1,193 | 3,346 | 434 | 3,678 | 2,551 | 1,127 |
% DGV | 57.5% | 67.2% | 43.7% | 57.3% | 59.0% | 57.8% | 67.1% | 43.9% |
Med len in DGV | 6.6 kb | 7.6 kb | 4.5 kb | 5.2 kb | 77.0 kb | 5.8 kb | 6.8 kb | 3.9 kb |
Novel CNVs | 2,798 | 1,263 | 1,535 | 2,496 | 302 | 2,690 | 1,248 | 1,442 |
Med len novel | 3.4 kb | 3.6 kb | 3.2 kb | 2.8 kb | 64.5 kb | 3.0 kb | 3.2 kb | 2.6 kb |