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Table 3 Conservation of miRNAs in cotton and other plants

From: Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.)

  Embryophyte Eudicots Monocots
miRNA Moss Thale-cress Cottonwood Grape Cotton Rice Sorghum Maize
156/157 3 12 11 9 H,P,M,S 12 5 11
159   3 6 3 H,N,M,T 6 2 4
160 9 3 8 6 H,M,T 6 5 6
162   2 3 1 H,P,M,S 2   1
164   3 6 4 H,N,P,M,T 6 3 4
165/166 13 9 17 8 H,N,P,M,T,S 14 7 13
167 1 4 8 5 H,N,P,M,T 10 7 9
168   2 2 1 H,N,M,T 2 1 2
169   14 32 25 H 17 9 11
170/171 2 4 14 9 H,P,M 9 6 11
172   5 9 4 H,N,P,M,T,S 4 5 5
319 5 3 9 5 H 2 1 4
390 3 2 4 1 H,P,M,T 1   
393   2 4 2 H,P,M 2 1 1
394   2 2 3 P 1 2 2
396   2 7 4 H,P 6 3 4
397   2 3 2 H,M 2   
398   3 3 3 P,M 2   
399   6 12 9 H,P 11 9 6
408 2 1 1 1 H,M 1   1
479    1 1 P    
472/482   1 4 1 H,P,S    
530    2   H 1   
535 4    5 H,M 1   
827   1 1   H,P,S 3   
828   1   2 H,T    
894 1     H    
  1. H, homology; P, precursors detected; M, microarrays; N, Northern validated; T, targets identified; S, miRNA* sequenced. Numbers represent the number of precursor loci deposited in miRBase 13.0. Moss, Physcomitrella patens (Hedw.) Bruch & Schimp. in B. S. G.; thale-cress, Arabidopsis thaliana (L.) Heynh.; grape, Vitis vinifera L.; black cottonwood, Populus trichocarpa (Torr. & A. Gray) Brayshaw; cotton, Gossypium hirsutum L.; rice, Oryza sativa L.; sorghum, Sorghum bicolor (L.) Moench; and maize, Zea mays L.