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Table 2 MLPA results for some of the non-previously reported regions identified by ÇOKGEN

From: An optimization framework for unsupervised identification of rare copy number variation from SNP array data

Chromosome

Sample

Base-pair start*

Base-pair end*

Length (bp)

MLPA probe position

Type

MLPA

5

NA11830

59753489

59816458

62969

59766589

Gain

2.4

5

NA10846

101261596

101308054

46458

101261461

Loss

1.35

5

NA12144

101256012

101308054

52042

101279312

Loss

1.18

6

NA10846

99225525

99249603

24078

99237564

Loss

1.44

6

NA12144

99225007

99245596

20589

99226748

Loss

1.3

16

NA10839

77818007

77832838

14831

77819334

Loss

1.35

2

NA10854

108944933

108952869

7936

108945672

Loss

1.33

6

NA11830

97308635

97316868

8233

97311558

Loss

1.29

  1. *As inferred by ÇOKGEN.